STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003501annotation not available (346 aa)    
Predicted Functional Partners:
SERINC3
Serine incorporator 3.
    
  0.866
ENSPCAP00000015146
annotation not available
    
  0.866
ENSPCAP00000008496
annotation not available
      
 0.861
TRAF6
TNF receptor associated factor 6.
    
 
 0.745
ENSPCAP00000006692
annotation not available
    
 0.655
ENSPCAP00000000782
annotation not available
      
 0.626
RUBCN
Rubicon autophagy regulator.
      
 0.590
ICE2
Interactor of little elongation complex ELL subunit 2.
      
 0.580
ZFYVE1
Zinc finger FYVE-type containing 1.
      
 0.580
DCAF1
DDB1 and CUL4 associated factor 1.
      
 0.578
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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