STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIPK4Homeodomain interacting protein kinase 4. (599 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.956
RASSF5
Ras association domain family member 5.
    
 0.912
HIPK3
Homeodomain interacting protein kinase 3.
   
 
 
0.894
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
 0.769
SUMO1
Small ubiquitin like modifier 1.
    
 0.683
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.682
PIN1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
    
 0.669
EP300
E1A binding protein p300.
   
 0.658
CREBBP
CREB binding protein.
   
 0.646
MECP2
methyl-CpG binding protein 2.
    
 0.638
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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