Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD2LMBR1 domain containing 2. (671 aa)    
Predicted Functional Partners:
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.850
PITHD1
PITH domain containing 1.
      
 0.780
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
    0.693
UBAC1
UBA domain containing 1.
      
 0.645
CAPSL
Calcyphosine like.
 
    
 0.628
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
  
 0.606
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.594
FAM214A
Family with sequence similarity 214 member A.
      
 0.577
BICD1
BICD cargo adaptor 1.
      
 0.576
HMG20B
High mobility group 20B.
      
 0.575
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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