Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003547annotation not available (175 aa)    
Predicted Functional Partners:
GATM
Glycine amidinotransferase.
    
 0.981
CKM
Creatine kinase, M-type.
     
 0.928
ENSPCAP00000001455
annotation not available
     
 0.914
ENSPCAP00000013350
annotation not available
     
 0.914
RPL12
Ribosomal protein L12.
   
 
 0.887
ENSPCAP00000004799
annotation not available
   
    0.805
RPF2
Ribosome production factor 2 homolog.
   
    0.797
BYSL
Bystin like.
   
    0.797
ENSPCAP00000005796
annotation not available
   
    0.797
ENSPCAP00000012854
annotation not available
   
 
 0.793
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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