STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX6Sorting nexin 6. (418 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
   
 0.920
SNX1
Sorting nexin 1.
   
0.917
SNX5
Sorting nexin 5.
  
 
0.909
SNX4
Sorting nexin 4.
   
 0.836
SNX8
Sorting nexin 8.
    
 0.831
ENSPCAP00000015676
annotation not available
    
 0.822
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
    
 0.804
SNX30
Sorting nexin family member 30.
    
 0.804
SNX9
Sorting nexin 9.
     
 0.710
IGF2R
Insulin like growth factor 2 receptor.
     
 0.656
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.