Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POGKPogo transposable element derived with KRAB domain. (605 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
  0.888
LRRC52
Leucine rich repeat containing 52.
      
 0.854
TIGD5
Tigger transposable element derived 5.
      
 0.769
ENSPCAP00000005422
annotation not available
      
 0.769
TIGD7
Tigger transposable element derived 7.
      
 0.754
ENSPCAP00000002016
annotation not available
      
 0.692
TRIM33
Tripartite motif containing 33.
    
  0.680
WEE2
WEE2 oocyte meiosis inhibiting kinase.
    
   0.669
WEE1
WEE1 G2 checkpoint kinase.
    
   0.669
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.595
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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