Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003574annotation not available (639 aa)    
Predicted Functional Partners:
SRPRB
SRP receptor subunit beta.
  
 0.998
SRP54
Signal recognition particle 54.
  
 0.987
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.972
SRP9
Signal recognition particle 9.
    
 0.960
SRP72
Signal recognition particle 72.
   
 0.955
SRP68
Signal recognition particle 68.
   
 0.918
SRP19
Signal recognition particle 19.
   
 
 0.904
ENSPCAP00000014301
annotation not available
     
  0.901
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.836
RPL35
Ribosomal protein L35.
   
 
 0.810
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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