Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003587annotation not available (382 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.998
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.966
ENSPCAP00000013549
annotation not available
    
 
 0.956
MAPK3
Mitogen-activated protein kinase 3.
    
 0.953
MAPK1
Mitogen-activated protein kinase 1.
    
 0.953
GJB2
Gap junction protein beta 2.
    
 0.942
GJD3
Gap junction protein delta 3.
    
 0.940
GJB1
Gap junction protein beta 1.
    
 0.938
ENSPCAP00000000535
annotation not available
    
  0.937
GJD2
Gap junction protein delta 2.
    
  0.937
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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