Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPVLCarboxypeptidase vitellogenic like. (479 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
   0.889
TUSC3
Tumor suppressor candidate 3.
    
 
 0.881
CTSA
Cathepsin A.
   
 
 0.823
NEU1
Neuraminidase 1.
   
 0.822
DCTN2
Dynactin subunit 2.
    
   0.786
ALG5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
   0.778
SEPTIN7
Septin 7.
    
   0.751
SEPTIN11
Septin 11.
    
   0.751
SEPTIN9
Septin 9.
    
   0.751
VPS26A
VPS26, retromer complex component A.
    
 
 0.747
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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