Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB31RAB31, member RAS oncogene family. (192 aa)    
Predicted Functional Partners:
RAB22A
RAB22A, member RAS oncogene family.
   
  0.996
ENSPCAP00000010666
annotation not available
   
 0.966
CHM
CHM Rab escort protein.
    
 0.958
ENSPCAP00000012541
annotation not available
    
 0.912
GDI1
GDP dissociation inhibitor 1.
    
 0.912
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.898
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.898
RBSN
Rabenosyn, RAB effector.
    
 0.886
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.866
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 
 0.865
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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