ENSPCAP00000003605 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000003605

annotation not available (338 aa)

Predicted Functional Partners:

FTSJ3

0.995

DDX27

0.994

RBM28

0.994

RPF2

0.988

ENSPCAP00000004799

0.988

CEBPZ

0.988

DDX24

0.987

ENSPCAP00000000904

0.986

DDX54

0.986

DDX18

0.986

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEBPZ	DDX18	ENSPCAP00000011891	ENSPCAP00000009601	CCAAT enhancer binding protein zeta.	DEAD-box helicase 18.	0.996
CEBPZ	DDX24	ENSPCAP00000011891	ENSPCAP00000002704	CCAAT enhancer binding protein zeta.	DEAD-box helicase 24.	0.989
CEBPZ	DDX27	ENSPCAP00000011891	ENSPCAP00000003187	CCAAT enhancer binding protein zeta.	DEAD-box helicase 27.	0.992
CEBPZ	DDX54	ENSPCAP00000011891	ENSPCAP00000007971	CCAAT enhancer binding protein zeta.	DEAD-box helicase 54.	0.968
CEBPZ	ENSPCAP00000000904	ENSPCAP00000011891	ENSPCAP00000000904	CCAAT enhancer binding protein zeta.	annotation not available	0.996
CEBPZ	ENSPCAP00000003605	ENSPCAP00000011891	ENSPCAP00000003605	CCAAT enhancer binding protein zeta.	annotation not available	0.988
CEBPZ	ENSPCAP00000004799	ENSPCAP00000011891	ENSPCAP00000004799	CCAAT enhancer binding protein zeta.	annotation not available	0.995
CEBPZ	FTSJ3	ENSPCAP00000011891	ENSPCAP00000002445	CCAAT enhancer binding protein zeta.	FtsJ RNA 2'-O-methyltransferase 3.	0.974
CEBPZ	RBM28	ENSPCAP00000011891	ENSPCAP00000007722	CCAAT enhancer binding protein zeta.	RNA binding motif protein 28.	0.993
CEBPZ	RPF2	ENSPCAP00000011891	ENSPCAP00000002394	CCAAT enhancer binding protein zeta.	Ribosome production factor 2 homolog.	0.996
DDX18	CEBPZ	ENSPCAP00000009601	ENSPCAP00000011891	DEAD-box helicase 18.	CCAAT enhancer binding protein zeta.	0.996
DDX18	DDX24	ENSPCAP00000009601	ENSPCAP00000002704	DEAD-box helicase 18.	DEAD-box helicase 24.	0.981
DDX18	DDX27	ENSPCAP00000009601	ENSPCAP00000003187	DEAD-box helicase 18.	DEAD-box helicase 27.	0.996
DDX18	DDX54	ENSPCAP00000009601	ENSPCAP00000007971	DEAD-box helicase 18.	DEAD-box helicase 54.	0.992
DDX18	ENSPCAP00000000904	ENSPCAP00000009601	ENSPCAP00000000904	DEAD-box helicase 18.	annotation not available	0.997
DDX18	ENSPCAP00000003605	ENSPCAP00000009601	ENSPCAP00000003605	DEAD-box helicase 18.	annotation not available	0.986
DDX18	ENSPCAP00000004799	ENSPCAP00000009601	ENSPCAP00000004799	DEAD-box helicase 18.	annotation not available	0.996
DDX18	FTSJ3	ENSPCAP00000009601	ENSPCAP00000002445	DEAD-box helicase 18.	FtsJ RNA 2'-O-methyltransferase 3.	0.997
DDX18	RBM28	ENSPCAP00000009601	ENSPCAP00000007722	DEAD-box helicase 18.	RNA binding motif protein 28.	0.976
DDX18	RPF2	ENSPCAP00000009601	ENSPCAP00000002394	DEAD-box helicase 18.	Ribosome production factor 2 homolog.	0.996