STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1CFem-1 homolog C. (616 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 0.977
CUL2
Cullin 2.
    
 0.891
RBX1
Ring-box 1.
    
 0.817
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.740
ENSPCAP00000012638
annotation not available
    
  0.736
COMMD1
Copper metabolism domain containing 1.
    
  0.700
COMMD4
COMM domain containing 4.
    
  0.699
COMMD9
COMM domain containing 9.
    
  0.689
COMMD2
COMM domain containing 2.
    
  0.688
FNIP1
Folliculin interacting protein 1.
    
 
 0.665
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.