STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003655annotation not available (683 aa)    
Predicted Functional Partners:
ENSPCAP00000007126
annotation not available
    
  0.777
ENSPCAP00000014868
annotation not available
    
 0.672
TRIM28
Tripartite motif containing 28.
    
 0.625
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.571
VARS1
valyl-tRNA synthetase 1.
    
 
 0.562
ACAA2
acetyl-CoA acyltransferase 2.
    
 
 0.561
MRPS9
Mitochondrial ribosomal protein S9.
    
 0.552
TRIM33
Tripartite motif containing 33.
    
 0.548
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.546
ENSPCAP00000002326
annotation not available
   
  0.541
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.