Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM39Tripartite motif containing 39. (517 aa)    
Predicted Functional Partners:
ENSPCAP00000003430
annotation not available
    
 0.814
TRIM17
Tripartite motif containing 17.
    
   0.802
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
  0.801
ANKRD11
Ankyrin repeat domain 11.
    
 0.796
UBTD1
Ubiquitin domain containing 1.
    
   0.779
UBXN6
UBX domain protein 6.
    
   0.674
ICOS
Inducible T cell costimulator.
   
 0.670
ENSPCAP00000015075
annotation not available
    
 0.667
TRIM36
Tripartite motif containing 36.
      
 0.628
SQSTM1
Sequestosome 1.
    
 0.613
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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