Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEAP2Liver enriched antimicrobial peptide 2. (66 aa)    
Predicted Functional Partners:
PACS2
Phosphofurin acidic cluster sorting protein 2.
    
   0.695
HAMP
Hepcidin antimicrobial peptide.
      
 0.692
PACS1
Phosphofurin acidic cluster sorting protein 1.
    
   0.686
GHSR
Growth hormone secretagogue receptor.
    
 
 0.634
APOA2
Apolipoprotein A2.
   
  
 0.599
ENSPCAP00000000978
annotation not available
      
 0.579
ERH
ERH mRNA splicing and mitosis factor.
      
 0.553
WDR37
WD repeat domain 37.
    
   0.481
BPIFA3
BPI fold containing family A member 3.
      
 0.470
GUCD1
Guanylyl cyclase domain containing 1.
      
 0.425
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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