RO60 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

RO60

Ro60, Y RNA binding protein. (538 aa)

Predicted Functional Partners:

TRIM21

0.928

SSB

0.822

TRIM58

0.821

TRIM11

0.587

HARS2

0.512

XPOT

0.493

SNRPC

0.493

ENSPCAP00000011462

0.485

ENSPCAP00000000606

0.471

ENSPCAP00000001570

0.471

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000000606	RO60	ENSPCAP00000000606	ENSPCAP00000003687	annotation not available	Ro60, Y RNA binding protein.	0.471
ENSPCAP00000001570	RO60	ENSPCAP00000001570	ENSPCAP00000003687	annotation not available	Ro60, Y RNA binding protein.	0.471
ENSPCAP00000011462	RO60	ENSPCAP00000011462	ENSPCAP00000003687	annotation not available	Ro60, Y RNA binding protein.	0.485
HARS2	RO60	ENSPCAP00000001454	ENSPCAP00000003687	histidyl-tRNA synthetase 2, mitochondrial.	Ro60, Y RNA binding protein.	0.512
RO60	ENSPCAP00000000606	ENSPCAP00000003687	ENSPCAP00000000606	Ro60, Y RNA binding protein.	annotation not available	0.471
RO60	ENSPCAP00000001570	ENSPCAP00000003687	ENSPCAP00000001570	Ro60, Y RNA binding protein.	annotation not available	0.471
RO60	ENSPCAP00000011462	ENSPCAP00000003687	ENSPCAP00000011462	Ro60, Y RNA binding protein.	annotation not available	0.485
RO60	HARS2	ENSPCAP00000003687	ENSPCAP00000001454	Ro60, Y RNA binding protein.	histidyl-tRNA synthetase 2, mitochondrial.	0.512
RO60	SNRPC	ENSPCAP00000003687	ENSPCAP00000015788	Ro60, Y RNA binding protein.	Small nuclear ribonucleoprotein polypeptide C.	0.493
RO60	SSB	ENSPCAP00000003687	ENSPCAP00000009585	Ro60, Y RNA binding protein.	Small RNA binding exonuclease protection factor La.	0.822
RO60	TRIM11	ENSPCAP00000003687	ENSPCAP00000007994	Ro60, Y RNA binding protein.	Tripartite motif containing 11.	0.587
RO60	TRIM21	ENSPCAP00000003687	ENSPCAP00000004175	Ro60, Y RNA binding protein.	Tripartite motif containing 21.	0.928
RO60	TRIM58	ENSPCAP00000003687	ENSPCAP00000008763	Ro60, Y RNA binding protein.	Tripartite motif containing 58.	0.821
RO60	XPOT	ENSPCAP00000003687	ENSPCAP00000001536	Ro60, Y RNA binding protein.	Exportin for tRNA.	0.493
SNRPC	RO60	ENSPCAP00000015788	ENSPCAP00000003687	Small nuclear ribonucleoprotein polypeptide C.	Ro60, Y RNA binding protein.	0.493
SSB	RO60	ENSPCAP00000009585	ENSPCAP00000003687	Small RNA binding exonuclease protection factor La.	Ro60, Y RNA binding protein.	0.822
TRIM11	RO60	ENSPCAP00000007994	ENSPCAP00000003687	Tripartite motif containing 11.	Ro60, Y RNA binding protein.	0.587
TRIM21	RO60	ENSPCAP00000004175	ENSPCAP00000003687	Tripartite motif containing 21.	Ro60, Y RNA binding protein.	0.928
TRIM58	RO60	ENSPCAP00000008763	ENSPCAP00000003687	Tripartite motif containing 58.	Ro60, Y RNA binding protein.	0.821
XPOT	RO60	ENSPCAP00000001536	ENSPCAP00000003687	Exportin for tRNA.	Ro60, Y RNA binding protein.	0.493