TYRO3 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TYRO3

TYRO3 protein tyrosine kinase. (846 aa)

Predicted Functional Partners:

GAS6

0.897

ENSPCAP00000014868

0.845

ENSPCAP00000005764

0.795

TAB1

0.793

TRAF6

0.774

ENSPCAP00000004706

0.767

ENSPCAP00000008443

0.767

MIB2

0.736

ENSPCAP00000000081

0.734

PLCG1

0.722

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000000081	MIB2	ENSPCAP00000000081	ENSPCAP00000009622	annotation not available	Mindbomb E3 ubiquitin protein ligase 2.	0.687
ENSPCAP00000000081	TAB1	ENSPCAP00000000081	ENSPCAP00000002924	annotation not available	TGF-beta activated kinase 1 (MAP3K7) binding protein 1.	0.775
ENSPCAP00000000081	TRAF6	ENSPCAP00000000081	ENSPCAP00000011921	annotation not available	TNF receptor associated factor 6.	0.997
ENSPCAP00000000081	TYRO3	ENSPCAP00000000081	ENSPCAP00000003704	annotation not available	TYRO3 protein tyrosine kinase.	0.734
ENSPCAP00000004706	PLCG1	ENSPCAP00000004706	ENSPCAP00000006833	annotation not available	Phospholipase C gamma 1.	0.687
ENSPCAP00000004706	TYRO3	ENSPCAP00000004706	ENSPCAP00000003704	annotation not available	TYRO3 protein tyrosine kinase.	0.767
ENSPCAP00000005764	GAS6	ENSPCAP00000005764	ENSPCAP00000012343	annotation not available	Growth arrest specific 6.	0.444
ENSPCAP00000005764	TYRO3	ENSPCAP00000005764	ENSPCAP00000003704	annotation not available	TYRO3 protein tyrosine kinase.	0.795
ENSPCAP00000008443	PLCG1	ENSPCAP00000008443	ENSPCAP00000006833	annotation not available	Phospholipase C gamma 1.	0.687
ENSPCAP00000008443	TYRO3	ENSPCAP00000008443	ENSPCAP00000003704	annotation not available	TYRO3 protein tyrosine kinase.	0.767
ENSPCAP00000014868	GAS6	ENSPCAP00000014868	ENSPCAP00000012343	annotation not available	Growth arrest specific 6.	0.829
ENSPCAP00000014868	MIB2	ENSPCAP00000014868	ENSPCAP00000009622	annotation not available	Mindbomb E3 ubiquitin protein ligase 2.	0.628
ENSPCAP00000014868	PLCG1	ENSPCAP00000014868	ENSPCAP00000006833	annotation not available	Phospholipase C gamma 1.	0.784
ENSPCAP00000014868	TYRO3	ENSPCAP00000014868	ENSPCAP00000003704	annotation not available	TYRO3 protein tyrosine kinase.	0.845
GAS6	ENSPCAP00000005764	ENSPCAP00000012343	ENSPCAP00000005764	Growth arrest specific 6.	annotation not available	0.444
GAS6	ENSPCAP00000014868	ENSPCAP00000012343	ENSPCAP00000014868	Growth arrest specific 6.	annotation not available	0.829
GAS6	MIB2	ENSPCAP00000012343	ENSPCAP00000009622	Growth arrest specific 6.	Mindbomb E3 ubiquitin protein ligase 2.	0.590
GAS6	TYRO3	ENSPCAP00000012343	ENSPCAP00000003704	Growth arrest specific 6.	TYRO3 protein tyrosine kinase.	0.897
MIB2	ENSPCAP00000000081	ENSPCAP00000009622	ENSPCAP00000000081	Mindbomb E3 ubiquitin protein ligase 2.	annotation not available	0.687
MIB2	ENSPCAP00000014868	ENSPCAP00000009622	ENSPCAP00000014868	Mindbomb E3 ubiquitin protein ligase 2.	annotation not available	0.628