STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLF1SMC5-SMC6 complex localization factor 1. (970 aa)    
Predicted Functional Partners:
ATR
ATR serine/threonine kinase.
    
 0.998
BARD1
BRCA1 associated RING domain 1.
   
0.998
BRIP1
BRCA1 interacting protein C-terminal helicase 1.
  
 0.996
ENSPCAP00000010792
annotation not available
  
 0.996
ENSPCAP00000015866
annotation not available
    
 0.996
CDC45
Cell division cycle 45.
   
 
 0.994
ATM
ATM serine/threonine kinase.
   
 0.993
WRN
WRN RecQ like helicase.
  
 0.993
RAD17
RAD17 checkpoint clamp loader component.
  
 0.992
ATRIP
ATR interacting protein.
    
 0.992
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.