Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC86Coiled-coil domain containing 86. (361 aa)    
Predicted Functional Partners:
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 
 0.988
NSA2
NSA2 ribosome biogenesis factor.
   
   0.959
GNL3
G protein nucleolar 3.
   
 
 0.830
RPF2
Ribosome production factor 2 homolog.
   
 
 0.810
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.801
GNL3L
G protein nucleolar 3 like.
   
 
 0.797
LLPH
LLP homolog, long-term synaptic facilitation factor.
   
   0.789
ENSPCAP00000015177
annotation not available
   
   0.788
ZNF593
Zinc finger protein 593.
   
   0.780
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
   0.779
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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