Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003752annotation not available (265 aa)    
Predicted Functional Partners:
NUP54
Nucleoporin 54.
   
 0.995
NUP93
Nucleoporin 93.
   
 0.986
ENSPCAP00000006964
annotation not available
   
 0.979
NUTF2
Nuclear transport factor 2.
    
 0.978
NUP43
Nucleoporin 43.
   
 0.975
NUP88
Nucleoporin 88.
   
 0.975
RANBP2
RAN binding protein 2.
   
 0.972
NUP98
Nucleoporin 98.
   
 0.972
NUP37
Nucleoporin 37.
    
 0.971
NUP35
Nucleoporin 35.
    
 0.968
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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