Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDR2Cerebellar degeneration related protein 2. (406 aa)    
Predicted Functional Partners:
KTN1
Kinectin 1.
    
   0.954
ENSPCAP00000002944
annotation not available
    
   0.953
ENSPCAP00000000790
annotation not available
      
 0.912
ENSPCAP00000004790
annotation not available
    
   0.911
IGSF3
Immunoglobulin superfamily member 3.
    
   0.817
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 
 0.791
CDT1
Chromatin licensing and DNA replication factor 1.
   
   0.732
MAPK1IP1L
Mitogen-activated protein kinase 1 interacting protein 1 like.
    
   0.664
RRBP1
Ribosome binding protein 1.
    
   0.664
ENSPCAP00000009021
annotation not available
      
 0.582
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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