STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003827annotation not available (1561 aa)    
Predicted Functional Partners:
ENSPCAP00000002295
annotation not available
    
 
 0.778
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.726
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.629
CEP120
Centrosomal protein 120.
    
 0.623
CEP290
Centrosomal protein 290.
    
 0.606
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.605
CEP97
Centrosomal protein 97.
    
 
 0.588
UBE3A
Ubiquitin protein ligase E3A.
    
 
 0.582
CCDC22
Coiled-coil domain containing 22.
     
 0.571
CAND1
Cullin associated and neddylation dissociated 1.
     
 0.567
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.