Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAP30BPSAP30 binding protein. (307 aa)    
Predicted Functional Partners:
THOC1
THO complex 1.
   
 
 0.959
PUF60
poly(U) binding splicing factor 60.
   
   0.959
ENSPCAP00000009814
annotation not available
   
   0.958
CCNL1
Cyclin L1.
    
   0.953
RBM17
RNA binding motif protein 17.
   
   0.897
ENSPCAP00000001569
annotation not available
    
   0.892
ENSPCAP00000014603
annotation not available
   
   0.835
CDK10
Cyclin dependent kinase 10.
   
   0.827
SF3A2
Splicing factor 3a subunit 2.
   
   0.812
SAP30
Sin3A associated protein 30.
     
 0.795
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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