STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A4Solute carrier family 1 member 4. (525 aa)    
Predicted Functional Partners:
SLC3A2
Solute carrier family 3 member 2.
  
 
 0.613
SQSTM1
Sequestosome 1.
      
 0.601
RHOH
Ras homolog family member H.
    
 0.560
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
    
 0.548
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.522
SLC13A3
Solute carrier family 13 member 3.
    
 0.519
ENSPCAP00000003089
annotation not available
    
 0.519
ENSPCAP00000009996
annotation not available
    
 0.519
SLC13A1
Solute carrier family 13 member 1.
    
 0.519
SLC13A4
Solute carrier family 13 member 4.
    
 0.519
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.