STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003862annotation not available (266 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.949
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
   
0.881
ENSPCAP00000003318
annotation not available
   
0.878
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
0.856
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 0.844
ENSPCAP00000012255
annotation not available
   
0.831
ENSPCAP00000014868
annotation not available
    
 0.831
RPS14
Ribosomal protein S14.
   
 0.825
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
0.815
ENSPCAP00000015472
annotation not available
    
 0.811
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.