STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIL3Nuclear factor, interleukin 3 regulated. (358 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.875
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.870
COX2
Cytochrome c oxidase subunit II.
    
 0.847
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.813
COX4I2
Cytochrome c oxidase subunit 4I2.
   
 0.781
ENSPCAP00000013774
annotation not available
   
 0.781
ATF4
Activating transcription factor 4.
   
 0.776
ATF5
Activating transcription factor 5.
   
 0.776
COX3
Cytochrome c oxidase subunit III.
    
 0.766
COX6A2
Cytochrome c oxidase subunit 6A2.
   
 0.753
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.