STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1076 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.823
ENSPCAP00000005800
annotation not available
    
 
0.663
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.608
APBB2
Amyloid beta precursor protein binding family B member 2.
      
 0.514
BTBD8
BTB domain containing 8.
  
     0.477
MECOM
MDS1 and EVI1 complex locus.
  
 
   0.467
ENSPCAP00000001397
annotation not available
  
     0.467
HDAC1
Histone deacetylase 1.
    
 
 0.429
HDAC2
Histone deacetylase 2.
    
 
 0.429
ENSPCAP00000002727
annotation not available
      
 0.424
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.