STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003902annotation not available (268 aa)    
Predicted Functional Partners:
ENSPCAP00000006892
annotation not available
    
 0.991
LSM10
LSM10, U7 small nuclear RNA associated.
   
 0.985
GEMIN2
Gem nuclear organelle associated protein 2.
    
 0.985
ENSPCAP00000010409
annotation not available
   
 0.981
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.981
ENSPCAP00000007315
annotation not available
   
 0.971
GEMIN5
Gem nuclear organelle associated protein 5.
   
 0.957
ENSPCAP00000012299
annotation not available
    
 0.957
GEMIN4
Gem nuclear organelle associated protein 4.
    
 0.939
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.921
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.