STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003947annotation not available (3199 aa)    
Predicted Functional Partners:
ENSPCAP00000007408
annotation not available
   
 0.895
ENSPCAP00000011867
annotation not available
 
      0.895
RTP4
Receptor transporter protein 4.
   
  
 0.779
ENSPCAP00000007347
annotation not available
    
  0.755
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
   
 0.723
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.720
ENSPCAP00000005502
annotation not available
  
 
 0.672
ENSPCAP00000000690
annotation not available
   
 0.629
WDR90
WD repeat domain 90.
    
 0.624
NSL1
NSL1 component of MIS12 kinetochore complex.
    
 0.618
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.