STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA3PTPRF interacting protein alpha 3. (1191 aa)    
Predicted Functional Partners:
ENSPCAP00000007837
annotation not available
   
 0.990
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.953
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.888
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.854
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.854
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
   0.836
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
   0.836
PPFIBP1
PPFIA binding protein 1.
   
0.830
PPFIBP2
PPFIA binding protein 2.
   
0.830
ENSPCAP00000014106
annotation not available
    
 0.786
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.