STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAB1N-terminal EF-hand calcium binding protein 1. (330 aa)    
Predicted Functional Partners:
ENSPCAP00000014868
annotation not available
   
 0.829
WDR90
WD repeat domain 90.
    
 0.652
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.644
ENSPCAP00000003739
annotation not available
    
 0.636
ARID4A
AT-rich interaction domain 4A.
    
 0.635
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.622
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.616
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.613
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.613
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.595
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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