STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004010annotation not available (357 aa)    
Predicted Functional Partners:
CD8A
CD8a molecule.
    
 0.807
B2M
Beta-2-microglobulin.
   
 0.776
TAPBP
TAP binding protein.
   
 0.771
RPA2
Replication protein A2.
   
 0.765
CALR
Calreticulin.
    
  0.735
PDIA3
Protein disulfide isomerase family A member 3.
    
  0.708
ENSPCAP00000006628
annotation not available
    
 0.670
ENSPCAP00000008538
annotation not available
    
 0.670
ENSPCAP00000010930
annotation not available
    
 0.670
ENSPCAP00000015472
annotation not available
  
 
  0.649
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.