close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (432 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
 0.982
PNISR
PNN interacting serine and arginine rich protein.
   
  
 0.974
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 
 0.921
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.901
SF3B3
Splicing factor 3b subunit 3.
    
 0.890
LSM10
LSM10, U7 small nuclear RNA associated.
    
 
 0.881
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.880
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 
 0.879
PNN
Pinin, desmosome associated protein.
   
   0.876
ENSPCAP00000010409
annotation not available
    
 
 0.869
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.