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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BET1LBet1 golgi vesicular membrane trafficking protein like. (111 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5.
   
 0.995
ENSPCAP00000002114
annotation not available
   
 0.994
YKT6
YKT6 v-SNARE homolog.
    
 0.993
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.990
USO1
USO1 vesicle transport factor.
    
 0.983
SCFD1
Sec1 family domain containing 1.
   
 0.978
SEC22A
SEC22 homolog A, vesicle trafficking protein.
    
 0.960
SEC22C
SEC22 homolog C, vesicle trafficking protein.
    
 0.947
NAPA
NSF attachment protein alpha.
    
 0.876
NAPB
NSF attachment protein beta.
    
 0.876
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.