Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCARB2Scavenger receptor class B member 2. (386 aa)    
Predicted Functional Partners:
TMEM130
Transmembrane protein 130.
   
 
 0.943
CD63
CD63 molecule.
     
 0.882
LDLR
Low density lipoprotein receptor.
    
 0.805
APOB
Apolipoprotein B.
    
 0.776
THBS1
Thrombospondin 1.
    
 0.721
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.716
TSPAN3
Tetraspanin 3.
     
 0.699
ABI3BP
ABI family member 3 binding protein.
      
 0.689
DAB2
DAB adaptor protein 2.
     
 0.670
ENSPCAP00000007347
annotation not available
     
 0.658
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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