close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004041annotation not available (1309 aa)    
Predicted Functional Partners:
LSM12
LSM12 homolog.
    
 0.984
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
     
 0.951
ENSPCAP00000001549
annotation not available
    
 0.943
DDX6
DEAD-box helicase 6.
    
 
 0.934
ATXN2L
Ataxin 2 like.
    
 
0.923
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
     
 0.911
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 
 0.911
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
     
 0.911
ENSPCAP00000004999
annotation not available
    
 
 0.877
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.812
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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