Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC16BSEC16 homolog B, endoplasmic reticulum export factor. (1060 aa)    
Predicted Functional Partners:
ENSPCAP00000002698
annotation not available
   
 0.970
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.966
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 0.959
ENSPCAP00000002848
annotation not available
   
 0.957
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.957
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.909
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.909
SEC23A
Sec23 homolog A, coat complex II component.
   
 0.902
SEC23B
SEC23 homolog B, coat complex II component.
   
 0.902
SAR1B
Secretion associated Ras related GTPase 1B.
    
 0.899
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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