close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC16BSEC16 homolog B, endoplasmic reticulum export factor. (1060 aa)    
Predicted Functional Partners:
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.982
ENSPCAP00000002698
annotation not available
   
 0.978
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 0.955
ENSPCAP00000002848
annotation not available
   
 0.946
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.946
SEC23A
Sec23 homolog A, coat complex II component.
   
 0.940
SEC23B
SEC23 homolog B, coat complex II component.
   
 0.940
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.891
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.891
SAR1B
Secretion associated Ras related GTPase 1B.
    
 0.861
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.