Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NR2C1Nuclear receptor subfamily 2 group C member 1. (542 aa)    
Predicted Functional Partners:
HDAC3
Histone deacetylase 3.
    
 0.965
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.863
PML
Promyelocytic leukemia.
    
   0.832
MED1
Mediator complex subunit 1.
    
  0.799
SUMO1
Small ubiquitin like modifier 1.
    
  0.783
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 
 0.744
TNF
Tumor necrosis factor.
    
  0.703
TP53BP1
Tumor protein p53 binding protein 1.
    
  0.702
JAZF1
JAZF zinc finger 1.
    
 
 0.700
NCOR2
Nuclear receptor corepressor 2.
   
 0.695
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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