Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E4F1E4F transcription factor 1. (782 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 0.931
RPL3
Ribosomal protein L3.
    
 
 0.793
RPL26L1
Ribosomal protein L26 like 1.
    
   0.781
ARID4A
AT-rich interaction domain 4A.
    
 0.754
MRPS22
Mitochondrial ribosomal protein S22.
    
  0.752
MRPS23
Mitochondrial ribosomal protein S23.
    
  0.748
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
  0.725
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.720
WDR24
WD repeat domain 24.
   
 
  0.703
HCFC1R1
Host cell factor C1 regulator 1.
      
 0.692
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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