Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004078annotation not available (152 aa)    
Predicted Functional Partners:
ENSPCAP00000005676
annotation not available
   
 0.956
VAMP1
Vesicle associated membrane protein 1.
   
 0.884
SNAP25
Synaptosome associated protein 25.
   
 0.713
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.708
NAGK
N-acetylglucosamine kinase.
     
 0.643
M1AP
Meiosis 1 associated protein.
     
 0.643
SYT10
Synaptotagmin 10.
    
 
 0.602
VAMP3
Vesicle associated membrane protein 3.
   
 0.596
SLC35C2
Solute carrier family 35 member C2.
      
 0.576
TUBGCP2
Tubulin gamma complex associated protein 2.
      
 0.566
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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