ENSPCAP00000004081 protein (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCAP00000004081

annotation not available (566 aa)

Predicted Functional Partners:

MTOR

0.937

MLST8

0.923

MAPKAP1

0.923

RICTOR

0.922

ITSN2

0.816

ITSN1

0.726

SGK1

0.648

ARHGAP1

0.593

DEPTOR

0.591

TTI1

0.588

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP1	ENSPCAP00000004081	ENSPCAP00000013022	ENSPCAP00000004081	Rho GTPase activating protein 1.	annotation not available	0.593
ARHGAP1	ITSN1	ENSPCAP00000013022	ENSPCAP00000010746	Rho GTPase activating protein 1.	Intersectin 1.	0.509
ARHGAP1	ITSN2	ENSPCAP00000013022	ENSPCAP00000001525	Rho GTPase activating protein 1.	Intersectin 2.	0.770
DEPTOR	ENSPCAP00000004081	ENSPCAP00000010526	ENSPCAP00000004081	DEP domain containing MTOR interacting protein.	annotation not available	0.591
DEPTOR	MAPKAP1	ENSPCAP00000010526	ENSPCAP00000004851	DEP domain containing MTOR interacting protein.	MAPK associated protein 1.	0.856
DEPTOR	MLST8	ENSPCAP00000010526	ENSPCAP00000003958	DEP domain containing MTOR interacting protein.	MTOR associated protein, LST8 homolog.	0.988
DEPTOR	MTOR	ENSPCAP00000010526	ENSPCAP00000009219	DEP domain containing MTOR interacting protein.	Mechanistic target of rapamycin kinase.	0.996
DEPTOR	RICTOR	ENSPCAP00000010526	ENSPCAP00000002528	DEP domain containing MTOR interacting protein.	RPTOR independent companion of MTOR complex 2.	0.912
DEPTOR	SGK1	ENSPCAP00000010526	ENSPCAP00000009486	DEP domain containing MTOR interacting protein.	Serum/glucocorticoid regulated kinase 1.	0.787
DEPTOR	TTI1	ENSPCAP00000010526	ENSPCAP00000013871	DEP domain containing MTOR interacting protein.	TELO2 interacting protein 1.	0.593
ENSPCAP00000004081	ARHGAP1	ENSPCAP00000004081	ENSPCAP00000013022	annotation not available	Rho GTPase activating protein 1.	0.593
ENSPCAP00000004081	DEPTOR	ENSPCAP00000004081	ENSPCAP00000010526	annotation not available	DEP domain containing MTOR interacting protein.	0.591
ENSPCAP00000004081	ITSN1	ENSPCAP00000004081	ENSPCAP00000010746	annotation not available	Intersectin 1.	0.726
ENSPCAP00000004081	ITSN2	ENSPCAP00000004081	ENSPCAP00000001525	annotation not available	Intersectin 2.	0.816
ENSPCAP00000004081	MAPKAP1	ENSPCAP00000004081	ENSPCAP00000004851	annotation not available	MAPK associated protein 1.	0.923
ENSPCAP00000004081	MLST8	ENSPCAP00000004081	ENSPCAP00000003958	annotation not available	MTOR associated protein, LST8 homolog.	0.923
ENSPCAP00000004081	MTOR	ENSPCAP00000004081	ENSPCAP00000009219	annotation not available	Mechanistic target of rapamycin kinase.	0.937
ENSPCAP00000004081	RICTOR	ENSPCAP00000004081	ENSPCAP00000002528	annotation not available	RPTOR independent companion of MTOR complex 2.	0.922
ENSPCAP00000004081	SGK1	ENSPCAP00000004081	ENSPCAP00000009486	annotation not available	Serum/glucocorticoid regulated kinase 1.	0.648
ENSPCAP00000004081	TTI1	ENSPCAP00000004081	ENSPCAP00000013871	annotation not available	TELO2 interacting protein 1.	0.588