Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB10EF-hand calcium binding domain 10. (128 aa)    
Predicted Functional Partners:
EFCAB3
EF-hand calcium binding domain 3.
    
 
 0.902
EFHB
EF-hand domain family member B.
   
 
 0.883
ENSPCAP00000007308
annotation not available
    
 
 0.879
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.879
ENSPCAP00000000252
annotation not available
   
 
 0.851
CCT4
Chaperonin containing TCP1 subunit 4.
    
 0.816
CCT7
Chaperonin containing TCP1 subunit 7.
    
 0.816
ENSPCAP00000010118
annotation not available
    
 0.816
CCT2
Chaperonin containing TCP1 subunit 2.
    
 0.816
CCT3
Chaperonin containing TCP1 subunit 3.
    
 0.811
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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