close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB10EF-hand calcium binding domain 10. (128 aa)    
Predicted Functional Partners:
TSC1
TSC complex subunit 1.
    
 0.757
ENSPCAP00000002859
annotation not available
    
 0.757
TRAP1
TNF receptor associated protein 1.
    
 0.757
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.747
HSBP1
Heat shock factor binding protein 1.
    
 0.683
HYOU1
Hypoxia up-regulated 1.
    
 0.682
HSPA14
Heat shock protein family A (Hsp70) member 14.
    
 0.665
HSPA9
Heat shock protein family A (Hsp70) member 9.
    
 0.665
ENSPCAP00000011637
annotation not available
    
 0.647
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
 0.647
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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