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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCORBCL6 corepressor. (1751 aa)    
Predicted Functional Partners:
BCL6
BCL6 transcription repressor.
    
 0.965
PCGF1
Polycomb group ring finger 1.
    
 0.957
KDM2B
Lysine demethylase 2B.
    
 0.917
RNF2
Ring finger protein 2.
    
 
 0.886
BCL6B
BCL6B transcription repressor.
    
 0.878
PCGF6
Polycomb group ring finger 6.
    
 0.857
MLLT1
MLLT1 super elongation complex subunit.
    
 
 0.837
MLLT3
MLLT3 super elongation complex subunit.
    
 
 0.837
SKP1
S-phase kinase associated protein 1.
    
 0.822
RING1
Ring finger protein 1.
    
 
 0.760
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.