STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GINM1Glycoprotein integral membrane 1. (288 aa)    
Predicted Functional Partners:
ENSPCAP00000011777
annotation not available
    
 
 0.542
LCTL
Lactase like.
      
 0.529
UBE2G1
Ubiquitin conjugating enzyme E2 G1.
      
 0.523
S100A5
S100 calcium binding protein A5.
      
 0.499
S100A14
S100 calcium binding protein A14.
      
 0.499
ENSPCAP00000003036
annotation not available
      
 0.438
PIP4K2C
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
      
 0.426
HBS1L
HBS1 like translational GTPase.
      
 0.424
ENSPCAP00000015319
annotation not available
      
 0.422
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.