TMPRSS11E protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

TMPRSS11E

Transmembrane serine protease 11E. (370 aa)

Predicted Functional Partners:

CTRL

0.722

ENSPCAP00000011283

0.698

SPINT2

0.661

ENSPCAP00000010575

0.657

SERPINE1

0.653

SPINT1

0.637

ENSPCAP00000009040

0.631

KLK5

0.623

ENSPCAP00000014868

0.622

ENSPCAP00000008956

0.610

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Export your current network:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTRL	ENSPCAP00000008956	ENSPCAP00000014583	ENSPCAP00000008956	Chymotrypsin like.	annotation not available	0.654
CTRL	ENSPCAP00000009040	ENSPCAP00000014583	ENSPCAP00000009040	Chymotrypsin like.	annotation not available	0.812
CTRL	ENSPCAP00000010575	ENSPCAP00000014583	ENSPCAP00000010575	Chymotrypsin like.	annotation not available	0.556
CTRL	ENSPCAP00000014868	ENSPCAP00000014583	ENSPCAP00000014868	Chymotrypsin like.	annotation not available	0.622
CTRL	KLK5	ENSPCAP00000014583	ENSPCAP00000004303	Chymotrypsin like.	Kallikrein related peptidase 5.	0.579
CTRL	SPINT1	ENSPCAP00000014583	ENSPCAP00000007863	Chymotrypsin like.	Serine peptidase inhibitor, Kunitz type 1.	0.460
CTRL	SPINT2	ENSPCAP00000014583	ENSPCAP00000000592	Chymotrypsin like.	Serine peptidase inhibitor, Kunitz type 2.	0.472
CTRL	TMPRSS11E	ENSPCAP00000014583	ENSPCAP00000004133	Chymotrypsin like.	Transmembrane serine protease 11E.	0.722
ENSPCAP00000008956	CTRL	ENSPCAP00000008956	ENSPCAP00000014583	annotation not available	Chymotrypsin like.	0.654
ENSPCAP00000008956	ENSPCAP00000009040	ENSPCAP00000008956	ENSPCAP00000009040	annotation not available	annotation not available	0.413
ENSPCAP00000008956	ENSPCAP00000010575	ENSPCAP00000008956	ENSPCAP00000010575	annotation not available	annotation not available	0.505
ENSPCAP00000008956	ENSPCAP00000014868	ENSPCAP00000008956	ENSPCAP00000014868	annotation not available	annotation not available	0.622
ENSPCAP00000008956	SPINT1	ENSPCAP00000008956	ENSPCAP00000007863	annotation not available	Serine peptidase inhibitor, Kunitz type 1.	0.462
ENSPCAP00000008956	SPINT2	ENSPCAP00000008956	ENSPCAP00000000592	annotation not available	Serine peptidase inhibitor, Kunitz type 2.	0.475
ENSPCAP00000008956	TMPRSS11E	ENSPCAP00000008956	ENSPCAP00000004133	annotation not available	Transmembrane serine protease 11E.	0.610
ENSPCAP00000009040	CTRL	ENSPCAP00000009040	ENSPCAP00000014583	annotation not available	Chymotrypsin like.	0.812
ENSPCAP00000009040	ENSPCAP00000008956	ENSPCAP00000009040	ENSPCAP00000008956	annotation not available	annotation not available	0.413
ENSPCAP00000009040	ENSPCAP00000010575	ENSPCAP00000009040	ENSPCAP00000010575	annotation not available	annotation not available	0.584
ENSPCAP00000009040	ENSPCAP00000011283	ENSPCAP00000009040	ENSPCAP00000011283	annotation not available	annotation not available	0.499
ENSPCAP00000009040	ENSPCAP00000014868	ENSPCAP00000009040	ENSPCAP00000014868	annotation not available	annotation not available	0.622