SLC10A1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SLC10A1

Solute carrier family 10 member 1. (348 aa)

Predicted Functional Partners:

ABCB11

0.618

CYP7A1

0.612

ENSPCAP00000004231

0.572

ENSPCAP00000006258

0.572

ENSPCAP00000012472

0.572

SLCO1A2

0.565

BLOC1S6

0.565

OTC

0.532

PLEKHD1

0.525

NR0B2

0.525

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB11	CYP7A1	ENSPCAP00000014121	ENSPCAP00000004462	ATP binding cassette subfamily B member 11.	Cytochrome P450 family 7 subfamily A member 1.	0.580
ABCB11	ENSPCAP00000004231	ENSPCAP00000014121	ENSPCAP00000004231	ATP binding cassette subfamily B member 11.	annotation not available	0.498
ABCB11	ENSPCAP00000006258	ENSPCAP00000014121	ENSPCAP00000006258	ATP binding cassette subfamily B member 11.	annotation not available	0.636
ABCB11	ENSPCAP00000012472	ENSPCAP00000014121	ENSPCAP00000012472	ATP binding cassette subfamily B member 11.	annotation not available	0.498
ABCB11	NR0B2	ENSPCAP00000014121	ENSPCAP00000007688	ATP binding cassette subfamily B member 11.	Nuclear receptor subfamily 0 group B member 2.	0.635
ABCB11	SLC10A1	ENSPCAP00000014121	ENSPCAP00000004134	ATP binding cassette subfamily B member 11.	Solute carrier family 10 member 1.	0.618
BLOC1S6	SLC10A1	ENSPCAP00000011318	ENSPCAP00000004134	Biogenesis of lysosomal organelles complex 1 subunit 6.	Solute carrier family 10 member 1.	0.565
CYP7A1	ABCB11	ENSPCAP00000004462	ENSPCAP00000014121	Cytochrome P450 family 7 subfamily A member 1.	ATP binding cassette subfamily B member 11.	0.580
CYP7A1	ENSPCAP00000004231	ENSPCAP00000004462	ENSPCAP00000004231	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.415
CYP7A1	ENSPCAP00000006258	ENSPCAP00000004462	ENSPCAP00000006258	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.732
CYP7A1	ENSPCAP00000012472	ENSPCAP00000004462	ENSPCAP00000012472	Cytochrome P450 family 7 subfamily A member 1.	annotation not available	0.415
CYP7A1	NR0B2	ENSPCAP00000004462	ENSPCAP00000007688	Cytochrome P450 family 7 subfamily A member 1.	Nuclear receptor subfamily 0 group B member 2.	0.700
CYP7A1	SLC10A1	ENSPCAP00000004462	ENSPCAP00000004134	Cytochrome P450 family 7 subfamily A member 1.	Solute carrier family 10 member 1.	0.612
ENSPCAP00000004231	ABCB11	ENSPCAP00000004231	ENSPCAP00000014121	annotation not available	ATP binding cassette subfamily B member 11.	0.498
ENSPCAP00000004231	CYP7A1	ENSPCAP00000004231	ENSPCAP00000004462	annotation not available	Cytochrome P450 family 7 subfamily A member 1.	0.415
ENSPCAP00000004231	SLC10A1	ENSPCAP00000004231	ENSPCAP00000004134	annotation not available	Solute carrier family 10 member 1.	0.572
ENSPCAP00000004231	SLCO1A2	ENSPCAP00000004231	ENSPCAP00000004233	annotation not available	Solute carrier organic anion transporter family member 1A2.	0.887
ENSPCAP00000006258	ABCB11	ENSPCAP00000006258	ENSPCAP00000014121	annotation not available	ATP binding cassette subfamily B member 11.	0.636
ENSPCAP00000006258	CYP7A1	ENSPCAP00000006258	ENSPCAP00000004462	annotation not available	Cytochrome P450 family 7 subfamily A member 1.	0.732
ENSPCAP00000006258	NR0B2	ENSPCAP00000006258	ENSPCAP00000007688	annotation not available	Nuclear receptor subfamily 0 group B member 2.	0.752