Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF21BPHD finger protein 21B. (435 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
    
 0.887
HMG20B
High mobility group 20B.
    
 0.834
ENSPCAP00000001748
annotation not available
    
 0.753
ENSPCAP00000005150
annotation not available
    
 0.753
RCOR2
REST corepressor 2.
    
 0.730
MTA3
Metastasis associated 1 family member 3.
   
 0.730
MTA1
Metastasis associated 1.
   
 0.730
MTA2
Metastasis associated 1 family member 2.
   
 0.730
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.726
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.726
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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