PHF21B protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

PHF21B

PHD finger protein 21B. (435 aa)

Predicted Functional Partners:

RCOR2

0.824

ENSPCAP00000001748

0.820

ENSPCAP00000005150

0.820

RCOR1

0.814

ARID4A

0.808

ENSPCAP00000003739

0.808

RBBP7

0.804

RBBP4

0.804

WDR73

0.804

ACTR5

0.789

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTR5	PHF21B	ENSPCAP00000013767	ENSPCAP00000004137	Actin related protein 5.	PHD finger protein 21B.	0.789
ARID4A	ENSPCAP00000001748	ENSPCAP00000002075	ENSPCAP00000001748	AT-rich interaction domain 4A.	annotation not available	0.767
ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	ENSPCAP00000003739	AT-rich interaction domain 4A.	annotation not available	0.715
ARID4A	ENSPCAP00000005150	ENSPCAP00000002075	ENSPCAP00000005150	AT-rich interaction domain 4A.	annotation not available	0.767
ARID4A	PHF21B	ENSPCAP00000002075	ENSPCAP00000004137	AT-rich interaction domain 4A.	PHD finger protein 21B.	0.808
ARID4A	RBBP4	ENSPCAP00000002075	ENSPCAP00000010289	AT-rich interaction domain 4A.	RB binding protein 4, chromatin remodeling factor.	0.997
ARID4A	RBBP7	ENSPCAP00000002075	ENSPCAP00000004487	AT-rich interaction domain 4A.	RB binding protein 7, chromatin remodeling factor.	0.997
ARID4A	RCOR1	ENSPCAP00000002075	ENSPCAP00000012923	AT-rich interaction domain 4A.	REST corepressor 1.	0.974
ARID4A	RCOR2	ENSPCAP00000002075	ENSPCAP00000002642	AT-rich interaction domain 4A.	REST corepressor 2.	0.974
ARID4A	WDR73	ENSPCAP00000002075	ENSPCAP00000014985	AT-rich interaction domain 4A.	WD repeat domain 73.	0.997
ENSPCAP00000001748	ARID4A	ENSPCAP00000001748	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.767
ENSPCAP00000001748	ENSPCAP00000003739	ENSPCAP00000001748	ENSPCAP00000003739	annotation not available	annotation not available	0.767
ENSPCAP00000001748	ENSPCAP00000005150	ENSPCAP00000001748	ENSPCAP00000005150	annotation not available	annotation not available	0.929
ENSPCAP00000001748	PHF21B	ENSPCAP00000001748	ENSPCAP00000004137	annotation not available	PHD finger protein 21B.	0.820
ENSPCAP00000001748	RBBP4	ENSPCAP00000001748	ENSPCAP00000010289	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.995
ENSPCAP00000001748	RBBP7	ENSPCAP00000001748	ENSPCAP00000004487	annotation not available	RB binding protein 7, chromatin remodeling factor.	0.995
ENSPCAP00000001748	RCOR1	ENSPCAP00000001748	ENSPCAP00000012923	annotation not available	REST corepressor 1.	0.521
ENSPCAP00000001748	RCOR2	ENSPCAP00000001748	ENSPCAP00000002642	annotation not available	REST corepressor 2.	0.521
ENSPCAP00000001748	WDR73	ENSPCAP00000001748	ENSPCAP00000014985	annotation not available	WD repeat domain 73.	0.995
ENSPCAP00000003739	ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.715