Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004138annotation not available (1548 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta 1.
    
 0.964
TGFB3
Transforming growth factor beta 3.
   
 0.882
THBS1
Thrombospondin 1.
   
 
 0.865
TGFB2
Transforming growth factor beta 2.
    
 0.846
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.741
THBS2
Thrombospondin 2.
   
 
 0.732
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 0.712
ENSPCAP00000014868
annotation not available
    
 0.677
VWA1
Von Willebrand factor A domain containing 1.
   
 0.662
ENSPCAP00000007645
annotation not available
   
 0.641
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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