close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1SET and MYND domain containing 1. (490 aa)    
Predicted Functional Partners:
ENSPCAP00000013473
annotation not available
    
 0.880
TP53
Tumor protein p53.
   
 0.875
DOT1L
DOT1 like histone lysine methyltransferase.
    
 0.860
KMT2E
Lysine methyltransferase 2E.
    
 0.827
SMYD3
SET and MYND domain containing 3.
   
0.826
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  0.810
ENSPCAP00000009778
annotation not available
   
  0.810
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  0.810
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.803
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.799
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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