Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL16A1Collagen type XVI alpha 1 chain. (1605 aa)    
Predicted Functional Partners:
ENSPCAP00000009042
annotation not available
     
  0.903
ENSPCAP00000007645
annotation not available
   
 0.875
ITGA10
Integrin subunit alpha 10.
    
 0.724
FBN1
Fibrillin 1.
   
 0.712
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
 0.707
ENSPCAP00000006712
annotation not available
   
 0.701
ENSPCAP00000014868
annotation not available
    
 0.692
COL5A3
Collagen type V alpha 3 chain.
   
 0.691
COL5A1
Collagen type V alpha 1 chain.
   
 0.691
COL11A2
Collagen type XI alpha 2 chain.
   
 0.691
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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